Palindromic motif
WebJun 21, 2024 · In the current study, AtsR recognized the consensus motif [TGCAA-N 2-TTGCA] with a 5-bp perfect palindromic sequence, which was nearly the same length to … WebDec 20, 2016 · The analysis reveals that unique palindromic as well as pseudo-palindromic motifs are surprisingly common and found among VapB antitoxins from a wide range of microbial species including Acidobacteria, Cyanobacteria, Proteobacteria, Spirochaetes, thermophilic bacteria as well as both branches of archaea, Crenarchaeota …
Palindromic motif
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WebJan 29, 2014 · DNA motif for WUSCHEL (WUS)-related homeobox WOX13 is partially compatible to that described for the related WUS (ref. 12; TTAATSS; S: G or C). GATA12 recognized the palindromic motif AGATCT, nearly identical to the consensus motif described for this family but differing at a critical residue (WGATAR; W: A or T). The ... WebSep 28, 2007 · The toxin has RNAse activity and causes cell growth arrest, presumably by degrading cellular mRNAs, unless it is sequestered into a catalytically inactive complex by the antitoxin. Two copies of the complex bind cooperatively to a conserved palindromic motif in the operator region of the operon, repressing its transcription.
WebComprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter Definitive identification of promoters, their cis-regulatory motifs, and their trans-acting proteins requires experimental analysis. WebOct 23, 2014 · A palindromic motif in the −2084 to −2078 region is essential for the promoter activity To pinpoint the critical bases that could be used for the genetic …
WebThey strongly activate B cells but stimulate weakly IFN-α secretion. Type C CpG ODNs combine features of both types A and B. They contain a complete phosphorothioate backbone and a CpG-containing palindromic motif. Type C CpG ODNs are potent inducers of IFN-α from pDC and strong B cell activators [5, 6]. WebBy using ChIP-sequencing data, we extracted the palindromic motif [CTT(N)7AAG] as a consensus SOG1-binding sequence, which mediates target gene induction in response to DNA damage. Furthermore, DNA damage-triggered phosphorylation of SOG1 is required for efficient binding to the SOG1-binding sequence.
WebJul 7, 2015 · A typical G nt R-family binding motif is a palindrome, but we have found that considerable number of identified palindromic binding sites is accompanied by a weaker adjacent half-site (box) at a distance of 7–12 nt. For a more quantitative analysis, regions flanking candidate binding sites of all studied TFs were considered. ...
WebType A CpG ODNs are characterized by a phosphodiester central CpG-containing palindromic motif and a phosphorothioate 3’ poly-G string. They induce high IFN-α … flat pack assembly service essexWebClass A CpG ODNs are characterized by a phosphodiester central CpG-containing palindromic motif and a phosphorothioate 3’ poly-G string. They induce high IFN-α production from plasmacytoid dendritic cells (pDC) but are weak stimulators of TLR9-dependent NF-kB signaling. flat pack assembly service londonWebApr 18, 2024 · A palindrome is a word, phrase, or sentence reads the same backward or forward--such as Madam, I'm Adam . Semordnilaps (the word palindromes in reverse) … flat pack assembly solihullWebAug 11, 2012 · This is the sequence where the restriction endonuclease, BamHI, binds to and cleaves at a specific cleavage site. When the complementary strand is read … flat pack assembly sheffieldWebOct 26, 2024 · Abstract A weak palindromic nucleotide motif is the hallmark of retroviral integration site alignments. Previously, the motifs were explained by an overlap of the … check raleigh bike serial numberWebJun 19, 2013 · (A) The conserved sequence, 5′ to 3′, identified by multiple motif analysis of promoters bound to and influenced by SpoVGSa. (B) EMSA with a labeled probe cap41, … check ram amount cmdWebOct 1, 2006 · Identification of a Palindromic Motif in the ECK Promoter as a Novel Recognition Site for p53 Binding To determine whether p53 physically binds to this palindromic site, we synthesized a 36-bp oligonucleotide containing the palindromic sequence (ECK oligo 36W) and used it as a probe to perform an electrophoretic mobility … check ram brand